Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBC1P01850 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBC1P01850 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBC1P01850 AP005018.1-201ENST00000525475 301 ntBASIC15.55■□□□□ 0.08
TRBC1P01850 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBC1P01850 AC120045.2-201ENST00000567334 178 ntBASIC15.55■□□□□ 0.08
TRBC1P01850 WFDC1-204ENST00000613603 549 ntBASIC15.55■□□□□ 0.08
TRBC1P01850 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBC1P01850 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBC1P01850 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBC1P01850 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBC1P01850 AC068587.6-202ENST00000641839 5619 ntBASIC15.55■□□□□ 0.08
TRBC1P01850 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRBC1P01850 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRBC1P01850 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 C18orf15-201ENST00000623680 2534 ntBASIC15.55■□□□□ 0.08
TRBC1P01850 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 PPT1-215ENST00000641471 2368 ntBASIC15.55■□□□□ 0.08
TRBC1P01850 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TRBC1P01850 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBC1P01850 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBC1P01850 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBC1P01850 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBC1P01850 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 AL359711.2-201ENST00000563105 872 ntBASIC15.54■□□□□ 0.08
TRBC1P01850 AC124283.3-201ENST00000570869 594 ntBASIC15.54■□□□□ 0.08
TRBC1P01850 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
TRBC1P01850 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBC1P01850 AC107373.2-201ENST00000607735 490 ntBASIC15.54■□□□□ 0.08
TRBC1P01850 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRBC1P01850 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRBC1P01850 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBC1P01850 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBC1P01850 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBC1P01850 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBC1P01850 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBC1P01850 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBC1P01850 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBC1P01850 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRBC1P01850 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBC1P01850 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRBC1P01850 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRBC1P01850 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBC1P01850 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBC1P01850 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.53■□□□□ 0.08
TRBC1P01850 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBC1P01850 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRBC1P01850 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 AC098614.1-201ENST00000368528 745 ntBASIC15.53■□□□□ 0.08
TRBC1P01850 RN7SL692P-201ENST00000464677 288 ntBASIC15.53■□□□□ 0.08
TRBC1P01850 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBC1P01850 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.53■□□□□ 0.08
TRBC1P01850 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms