Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.09□□□□□ -0.31
SIX6O95475 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
SIX6O95475 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SIX6O95475 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.08□□□□□ -0.31
SIX6O95475 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
SIX6O95475 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SIX6O95475 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.08□□□□□ -0.31
SIX6O95475 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SIX6O95475 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SIX6O95475 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SIX6O95475 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 KRT17P6-201ENST00000453795 1220 ntBASIC13.08□□□□□ -0.32
SIX6O95475 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.08□□□□□ -0.32
SIX6O95475 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.08□□□□□ -0.32
SIX6O95475 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 Z69720.1-201ENST00000601483 472 ntBASIC13.08□□□□□ -0.32
SIX6O95475 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.08□□□□□ -0.32
SIX6O95475 AL022326.1-202ENST00000641533 845 ntBASIC13.08□□□□□ -0.32
SIX6O95475 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.08□□□□□ -0.32
SIX6O95475 AC012569.1-201ENST00000591191 1524 ntBASIC13.08□□□□□ -0.32
SIX6O95475 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SIX6O95475 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SIX6O95475 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SIX6O95475 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 WASH3P-207ENST00000560956 1394 ntBASIC13.07□□□□□ -0.32
SIX6O95475 FO538757.1-201ENST00000623083 1397 ntBASIC13.07□□□□□ -0.32
SIX6O95475 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
SIX6O95475 CHCHD2P8-201ENST00000429873 447 ntBASIC13.07□□□□□ -0.32
SIX6O95475 AL137013.1-201ENST00000432946 1228 ntBASIC13.07□□□□□ -0.32
SIX6O95475 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.07□□□□□ -0.32
SIX6O95475 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.07□□□□□ -0.32
SIX6O95475 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.07□□□□□ -0.32
SIX6O95475 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.07□□□□□ -0.32
SIX6O95475 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SIX6O95475 AL589182.2-201ENST00000619332 1049 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms