Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK1BO75841 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 RPL5P21-201ENST00000404620 815 ntBASIC13.57□□□□□ -0.24
UPK1BO75841 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.57□□□□□ -0.24
UPK1BO75841 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.57□□□□□ -0.24
UPK1BO75841 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.57□□□□□ -0.24
UPK1BO75841 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.57□□□□□ -0.24
UPK1BO75841 NAPSB-206ENST00000562112 1266 ntBASIC13.57□□□□□ -0.24
UPK1BO75841 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
UPK1BO75841 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.57□□□□□ -0.24
UPK1BO75841 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
UPK1BO75841 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
UPK1BO75841 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UPK1BO75841 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
UPK1BO75841 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
UPK1BO75841 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 AP000845.1-201ENST00000581677 2131 ntBASIC13.56□□□□□ -0.24
UPK1BO75841 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 DMBT1P1-203ENST00000636837 4628 ntBASIC13.56□□□□□ -0.24
UPK1BO75841 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms