Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCN2BO60939 AL390755.1-201ENST00000623716 2027 ntBASIC14.78□□□□□ -0.04
SCN2BO60939 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.78□□□□□ -0.04
SCN2BO60939 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.78□□□□□ -0.04
SCN2BO60939 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.78□□□□□ -0.04
SCN2BO60939 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SCN2BO60939 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SCN2BO60939 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCN2BO60939 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.77□□□□□ -0.04
SCN2BO60939 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
SCN2BO60939 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCN2BO60939 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.77□□□□□ -0.05
SCN2BO60939 RPSAP43-201ENST00000402237 625 ntBASIC14.77□□□□□ -0.05
SCN2BO60939 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.77□□□□□ -0.05
SCN2BO60939 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.77□□□□□ -0.05
SCN2BO60939 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.77□□□□□ -0.05
SCN2BO60939 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 AL079307.3-201ENST00000556114 283 ntBASIC14.77□□□□□ -0.05
SCN2BO60939 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.77□□□□□ -0.05
SCN2BO60939 MIR4453-201ENST00000584019 89 ntBASIC14.77□□□□□ -0.05
SCN2BO60939 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 AC004835.2-201ENST00000603762 682 ntBASIC14.77□□□□□ -0.05
SCN2BO60939 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SCN2BO60939 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.77□□□□□ -0.05
SCN2BO60939 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.77□□□□□ -0.05
SCN2BO60939 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.77□□□□□ -0.05
SCN2BO60939 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCN2BO60939 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms