Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 AL591424.1-201ENST00000442569 1213 ntBASIC14.39□□□□□ -0.11
IDH3BO43837 AC009078.2-202ENST00000463353 338 ntBASIC14.39□□□□□ -0.11
IDH3BO43837 FAM86C2P-203ENST00000528684 1004 ntBASIC14.39□□□□□ -0.11
IDH3BO43837 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
IDH3BO43837 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
IDH3BO43837 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.39□□□□□ -0.11
IDH3BO43837 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.39□□□□□ -0.11
IDH3BO43837 AC008267.7-201ENST00000624570 1194 ntBASIC14.39□□□□□ -0.11
IDH3BO43837 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
IDH3BO43837 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
IDH3BO43837 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
IDH3BO43837 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.39□□□□□ -0.11
IDH3BO43837 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.39□□□□□ -0.11
IDH3BO43837 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.39□□□□□ -0.11
IDH3BO43837 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
IDH3BO43837 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
IDH3BO43837 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.39□□□□□ -0.11
IDH3BO43837 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IDH3BO43837 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.39□□□□□ -0.11
IDH3BO43837 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 ZNF259P1-201ENST00000407656 1365 ntBASIC14.38□□□□□ -0.11
IDH3BO43837 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IDH3BO43837 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
IDH3BO43837 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
IDH3BO43837 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.38□□□□□ -0.11
IDH3BO43837 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
IDH3BO43837 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.38□□□□□ -0.11
IDH3BO43837 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.38□□□□□ -0.11
IDH3BO43837 RNA5SP416-201ENST00000516838 111 ntBASIC14.38□□□□□ -0.11
IDH3BO43837 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 AL138918.1-201ENST00000568306 659 ntBASIC14.38□□□□□ -0.11
IDH3BO43837 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 AC099522.2-201ENST00000607001 744 ntBASIC14.38□□□□□ -0.11
IDH3BO43837 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
IDH3BO43837 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IDH3BO43837 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
IDH3BO43837 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IDH3BO43837 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.38□□□□□ -0.11
IDH3BO43837 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms