Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 AC023024.2-201ENST00000623561 1993 ntBASIC13.86□□□□□ -0.19
TRAF3IP2O43734 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 HMGN1P19-201ENST00000436976 333 ntBASIC13.86□□□□□ -0.19
TRAF3IP2O43734 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 UGT1A2P-201ENST00000454886 866 ntBASIC13.86□□□□□ -0.19
TRAF3IP2O43734 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 INGX-202ENST00000489074 768 ntBASIC13.86□□□□□ -0.19
TRAF3IP2O43734 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF3IP2O43734 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AC025181.2-201ENST00000606994 802 ntBASIC13.85□□□□□ -0.19
TRAF3IP2O43734 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF3IP2O43734 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms