Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 AC007967.2-201ENST00000432613 625 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC188H7C350 AL662844.1-201ENST00000546340 181 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CCDC188H7C350 KRT8P23-201ENST00000560090 1207 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC188H7C350 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC188H7C350 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 INTS4P1-203ENST00000641008 3683 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 AC113367.3-201ENST00000508316 1912 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 CICP4-201ENST00000447359 2812 ntBASIC16.18■□□□□ 0.18
CCDC188H7C350 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC188H7C350 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 MTHFR-210ENST00000641407 2387 ntBASIC16.18■□□□□ 0.18
CCDC188H7C350 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC188H7C350 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC188H7C350 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC188H7C350 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC188H7C350 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC188H7C350 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC188H7C350 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC188H7C350 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC188H7C350 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC188H7C350 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC188H7C350 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC188H7C350 FO393414.2-201ENST00000405153 598 ntBASIC16.17■□□□□ 0.18
CCDC188H7C350 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC188H7C350 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC188H7C350 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC188H7C350 AC243562.1-201ENST00000560672 389 ntBASIC16.17■□□□□ 0.18
CCDC188H7C350 LINC01225-203ENST00000563550 1244 ntBASIC16.17■□□□□ 0.18
CCDC188H7C350 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC188H7C350 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC188H7C350 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms