Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 MIR658-201ENST00000385210 100 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AC079776.1-201ENST00000401540 1152 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 FAM86LP-201ENST00000478302 853 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AC010319.3-201ENST00000597028 470 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AC097376.2-205ENST00000610159 5334 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AC007950.2-201ENST00000615045 2347 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AC018892.3-201ENST00000623986 2499 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 OR2I1P-209ENST00000641730 5365 ntBASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 MYO15B-237ENST00000642007 4893 ntBASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 KRT8P22-201ENST00000562317 1415 ntBASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 AC234783.1-201ENST00000441761 496 ntBASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 SLED1-202ENST00000512051 380 ntBASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 AL391069.4-201ENST00000609583 481 ntBASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 MIR6805-201ENST00000615055 62 ntBASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPA2E9PIF3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 AL365209.1-201ENST00000624418 6473 ntBASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA2E9PIF3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms