Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
YJEFN3A6XGL0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
YJEFN3A6XGL0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
YJEFN3A6XGL0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
YJEFN3A6XGL0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 KRT8P44-201ENST00000441609 1350 ntBASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 TMEM14DP-201ENST00000422205 345 ntBASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 KRT17P7-201ENST00000451704 1104 ntBASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 GIMAP3P-201ENST00000495150 836 ntBASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AP001582.1-201ENST00000525856 295 ntBASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AC092384.3-202ENST00000564646 2873 ntBASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.14■□□□□ 0.17
YJEFN3A6XGL0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 MST1L-201ENST00000442552 2185 ntBASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 AC046158.3-201ENST00000624947 2558 ntBASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 AC138035.3-201ENST00000622706 2791 ntBASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 TTTY23B-201ENST00000442790 549 ntBASIC16.13■□□□□ 0.17
YJEFN3A6XGL0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms