Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AC025181.2-201ENST00000606994 802 ntBASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 RHOXF1P1-202ENST00000635473 501 ntBASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 PRAL-201ENST00000624952 3286 ntBASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TBC1D3FA6NER0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 AC026691.1-201ENST00000602502 2017 ntBASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 YBX1P6-201ENST00000442962 1002 ntBASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 AC145423.3-201ENST00000615987 467 ntBASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TBC1D3FA6NER0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 ACTBP11-201ENST00000436287 1126 ntBASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms