Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 REXO1L4P-201ENST00000605109 1937 ntBASIC16.55■□□□□ 0.24
RCCD1A6NED2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 PGAM5P1-201ENST00000518923 814 ntBASIC16.54■□□□□ 0.24
RCCD1A6NED2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 ALG1L8P-201ENST00000533887 760 ntBASIC16.54■□□□□ 0.24
RCCD1A6NED2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 AC093520.2-201ENST00000561830 333 ntBASIC16.54■□□□□ 0.24
RCCD1A6NED2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 C20orf181-201ENST00000623918 480 ntBASIC16.54■□□□□ 0.24
RCCD1A6NED2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.54■□□□□ 0.24
RCCD1A6NED2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RCCD1A6NED2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCCD1A6NED2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC006504.5-208ENST00000588784 2401 ntBASIC16.53■□□□□ 0.24
RCCD1A6NED2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC022145.2-201ENST00000598203 171 ntBASIC16.53■□□□□ 0.24
RCCD1A6NED2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC022726.2-201ENST00000634673 547 ntBASIC16.53■□□□□ 0.24
RCCD1A6NED2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC015656.1-201ENST00000624209 3578 ntBASIC16.53■□□□□ 0.24
RCCD1A6NED2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RCCD1A6NED2 AC113367.3-201ENST00000508316 1912 ntBASIC16.53■□□□□ 0.24
RCCD1A6NED2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCCD1A6NED2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms