Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 AC079776.4-201ENST00000511039 504 ntBASIC16.97■□□□□ 0.31
CCDC66A2RUB6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 MBLAC2-202ENST00000514906 1936 ntBASIC16.96■□□□□ 0.31
CCDC66A2RUB6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 AC118758.2-201ENST00000614242 2813 ntBASIC16.96■□□□□ 0.31
CCDC66A2RUB6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FDX1P1-201ENST00000449115 551 ntBASIC16.96■□□□□ 0.31
CCDC66A2RUB6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC66A2RUB6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
CCDC66A2RUB6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CCDC66A2RUB6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC66A2RUB6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CCDC66A2RUB6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC66A2RUB6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC66A2RUB6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CCDC66A2RUB6 PMS2P7-201ENST00000506558 1336 ntBASIC16.96■□□□□ 0.3
CCDC66A2RUB6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 AC099521.3-201ENST00000624251 2938 ntBASIC16.95■□□□□ 0.3
CCDC66A2RUB6 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms