Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC142381.1-201ENST00000426099 345 ntBASIC13.56□□□□□ -0.24
SHISA3A0PJX4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC098831.1-202ENST00000438821 336 ntBASIC13.56□□□□□ -0.24
SHISA3A0PJX4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 LINC01711-201ENST00000598340 967 ntBASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 MIR7706-201ENST00000613747 67 ntBASIC13.56□□□□□ -0.24
SHISA3A0PJX4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AL161645.1-201ENST00000622716 1255 ntBASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC007064.4-201ENST00000637740 555 ntBASIC13.56□□□□□ -0.24
SHISA3A0PJX4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 MST1P2-201ENST00000457982 2291 ntBASIC13.56□□□□□ -0.24
SHISA3A0PJX4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA3A0PJX4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 UNC93B7-201ENST00000509439 705 ntBASIC13.55□□□□□ -0.24
SHISA3A0PJX4 RNA5SP410-201ENST00000516285 106 ntBASIC13.55□□□□□ -0.24
SHISA3A0PJX4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 AC099522.2-201ENST00000607001 744 ntBASIC13.55□□□□□ -0.24
SHISA3A0PJX4 AC012313.10-201ENST00000623509 926 ntBASIC13.55□□□□□ -0.24
SHISA3A0PJX4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms