Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 DGCR5-201ENST00000399539 862 ntBASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 SOCS2P1-201ENST00000417727 557 ntBASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 MIR3197-201ENST00000582241 73 ntBASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC133539.2-201ENST00000604757 467 ntBASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 AL360270.3-201ENST00000609118 1348 ntBASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 ENPP7P5-201ENST00000541031 1031 ntBASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 REXO1L2P-201ENST00000425429 2069 ntBASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV5-4A0A0C4DH59 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-4A0A0C4DH59 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL158070.2-201ENST00000623713 1621 ntBASIC15.21■□□□□ 0.02
TRBV5-4A0A0C4DH59 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TRBV5-4A0A0C4DH59 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV5-4A0A0C4DH59 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 NUS1P3-201ENST00000423502 862 ntBASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV5-4A0A0C4DH59 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms