Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 FO393414.2-201ENST00000405153 598 ntBASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AC125807.1-201ENST00000483097 614 ntBASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 HNRNPUP1-201ENST00000554987 333 ntBASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AL079307.3-201ENST00000556114 283 ntBASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 MIR6069-201ENST00000620069 79 ntBASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 Z92544.3-201ENST00000624747 417 ntBASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AL607033.1-201ENST00000623900 1599 ntBASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 KRT8P12-202ENST00000472924 1397 ntBASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AC013268.4-201ENST00000637413 2228 ntBASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AC109322.1-201ENST00000524499 1264 ntBASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AL512356.2-201ENST00000546955 174 ntBASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 AL133215.2-201ENST00000609242 977 ntBASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV1A0A0A0MS02 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
TRGV1A0A0A0MS02 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms