Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 FNTAP2-201ENST00000430308 634 ntBASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 POM121L10P-201ENST00000436994 1285 ntBASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 BX284668.4-201ENST00000453917 508 ntBASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 RN7SL190P-201ENST00000582519 257 ntBASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC187A0A096LP49 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AL662890.1-201ENST00000396818 632 ntBASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 MIR663B-201ENST00000408361 115 ntBASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AC079178.1-201ENST00000420915 656 ntBASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AC005077.2-201ENST00000449786 690 ntBASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AC025181.2-201ENST00000606994 802 ntBASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 CICP6-201ENST00000457191 2729 ntBASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC187A0A096LP49 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms