Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AL355994.2-201ENST00000447882 704 ntBASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AC107373.2-201ENST00000607735 490 ntBASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 TSPY26P-202ENST00000565928 3884 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 C2orf27AP3-201ENST00000434123 579 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 MIR4525-201ENST00000580000 75 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 AL354718.3-201ENST00000616414 581 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 CR382287.1-201ENST00000623954 586 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 RHOXF1P1-202ENST00000635473 501 ntBASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1G3Q9Y6M4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms