Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 CALR4P-201ENST00000431943 946 ntBASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 ENPP7P14-201ENST00000621765 1040 ntBASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 CNN2P10-201ENST00000443067 918 ntBASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 AC004898.1-201ENST00000451057 766 ntBASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 AP006547.1-201ENST00000563435 692 ntBASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHB7Q9Y5E2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 AP003680.1-201ENST00000598970 3660 ntBASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 AL158070.2-201ENST00000623713 1621 ntBASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 AKR7A2P1-201ENST00000460134 915 ntBASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB7Q9Y5E2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms