Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SNHG9-202ENST00000564014 471 ntBASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 TARDBPP1-201ENST00000442013 1203 ntBASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 AC004967.1-201ENST00000453589 447 ntBASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 AL512356.2-201ENST00000546955 174 ntBASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 AL589739.1-201ENST00000607720 493 ntBASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF11Q9Y3C5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 AC109322.1-201ENST00000524499 1264 ntBASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 LINC00628-201ENST00000628516 1289 ntBASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF11Q9Y3C5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 CICP14-201ENST00000629111 2732 ntBASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms