Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 AC073592.8-201ENST00000624126 511 ntBASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC4Q9Y296 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 RPL37AP1-201ENST00000412502 279 ntBASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 AL080243.2-201ENST00000418783 582 ntBASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAPPC4Q9Y296 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms