Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC112482.1-201ENST00000492080 688 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 KRT8P48-201ENST00000515599 1220 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 MIR4469-201ENST00000583919 79 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC010327.4-202ENST00000591484 748 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 MIR4321-201ENST00000592276 80 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AJ011931.1-201ENST00000618749 2492 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC105250.1-201ENST00000509378 2057 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 HAUS4P1-201ENST00000406739 1145 ntBASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 UPF3AP3-201ENST00000420996 769 ntBASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 AC005237.2-201ENST00000434368 219 ntBASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 SPCS2P4-201ENST00000436160 681 ntBASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 AC245100.5-201ENST00000452108 331 ntBASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 RNA5SP410-201ENST00000516285 106 ntBASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HHLA3Q9XRX5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 BEND3P1-201ENST00000421591 1944 ntBASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 PCDHA3-202ENST00000532566 4594 ntBASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms