Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHANK2Q9UPX8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 AC008132.1-202ENST00000342005 1389 ntBASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 CRCP-204ENST00000398684 492 ntTSL 2 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 FTLP1-201ENST00000449155 526 ntBASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 AC008267.1-201ENST00000474858 1069 ntBASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 RN7SL720P-201ENST00000488178 304 ntBASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 HNRNPA1P36-201ENST00000521313 955 ntBASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 AP000346.4-201ENST00000614827 381 ntBASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 AL136301.1-201ENST00000615830 422 ntBASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 API5-202ENST00000420461 2009 ntTSL 2 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SHANK2Q9UPX8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 AC003102.2-201ENST00000589195 1469 ntBASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC22.58■■□□□ 1.21
SHANK2Q9UPX8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 AC020658.6-201ENST00000623564 1870 ntBASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC22.58■■□□□ 1.2
SHANK2Q9UPX8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 AC007274.2-201ENST00000421675 662 ntBASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 MAGEA5-201ENST00000446757 942 ntBASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 AC245884.6-201ENST00000515672 1067 ntBASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 AC024681.1-201ENST00000521917 487 ntBASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms