Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ZBTB45P1-201ENST00000452761 1456 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SNRPD2P2-201ENST00000473818 333 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 RN7SL375P-201ENST00000492442 298 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AP001505.1-201ENST00000569966 824 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 EMP3-204ENST00000596315 761 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 CYP4F23P-201ENST00000593402 1579 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AL121753.2-201ENST00000624581 1461 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 FAM223B-202ENST00000598177 713 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 uc_338.24-201ENST00000617802 182 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC048382.6-201ENST00000621980 1223 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 FAM223A-202ENST00000625204 713 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 KRT18P55-202ENST00000578578 1546 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MACF1Q9UPN3 LETM1P2-201ENST00000597330 2178 ntBASIC6.12□□□□□ -1.43
MACF1Q9UPN3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 IFNWP19-201ENST00000438727 566 ntBASIC6.11□□□□□ -1.43
MACF1Q9UPN3 AC025594.1-201ENST00000469533 543 ntBASIC6.11□□□□□ -1.43
MACF1Q9UPN3 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 AC055811.4-201ENST00000624039 1754 ntBASIC6.11□□□□□ -1.43
MACF1Q9UPN3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 ASS1P2-201ENST00000439895 1223 ntBASIC6.11□□□□□ -1.43
MACF1Q9UPN3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC6.11□□□□□ -1.43
MACF1Q9UPN3 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms