Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 AL671277.1-201ENST00000429656 993 ntBASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 FAM197Y3-203ENST00000618346 717 ntBASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 AGAP7P-201ENST00000582299 2062 ntBASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 AGAP14-201ENST00000624701 2060 ntBASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 AL138918.1-201ENST00000568306 659 ntBASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 BX640515.1-201ENST00000617215 977 ntBASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 AC008267.7-201ENST00000624570 1194 ntBASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB4Q9UN71 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 TFAMP1-201ENST00000412727 736 ntBASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB4Q9UN71 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms