Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 CROCCP4-201ENST00000457096 498 ntBASIC14.3□□□□□ -0.12
LRFN1Q9P244 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.3□□□□□ -0.12
LRFN1Q9P244 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRFN1Q9P244 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 AL355864.2-201ENST00000447420 863 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 AC026410.3-201ENST00000514280 936 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 AC068587.3-201ENST00000526613 355 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 AP005482.1-201ENST00000563722 1273 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 AP001063.1-201ENST00000568332 529 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 AC093813.1-201ENST00000605066 256 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 DRD5P1-201ENST00000456605 1438 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 AC112504.1-201ENST00000623415 1841 ntBASIC14.29□□□□□ -0.12
LRFN1Q9P244 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.29□□□□□ -0.12
LRFN1Q9P244 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRFN1Q9P244 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms