Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC30.7■■■□□ 2.51
CCDC180Q9P1Z9 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC30.7■■■□□ 2.51
CCDC180Q9P1Z9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
CCDC180Q9P1Z9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC180Q9P1Z9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
CCDC180Q9P1Z9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC30.7■■■□□ 2.51
CCDC180Q9P1Z9 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC180Q9P1Z9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC180Q9P1Z9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 HIST2H2BA-201ENST00000412169 381 ntBASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 NEU3-207ENST00000534628 746 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 LINC01783-202ENST00000614408 828 ntBASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 BX284668.2-205ENST00000619677 828 ntBASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 AC244250.3-201ENST00000620749 366 ntBASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 AC112504.1-201ENST00000623415 1841 ntBASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC180Q9P1Z9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 AL807761.2-201ENST00000422849 729 ntBASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 ALG1L6P-201ENST00000515248 758 ntBASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC30.68■■■□□ 2.5
CCDC180Q9P1Z9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 AL512306.1-201ENST00000432698 848 ntBASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 AL137783.1-201ENST00000623494 1896 ntBASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC30.67■■■□□ 2.5
CCDC180Q9P1Z9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 C2orf69P1-201ENST00000563532 1093 ntBASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 ZBED1P1-201ENST00000502364 1930 ntBASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC30.66■■■□□ 2.5
CCDC180Q9P1Z9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms