Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 AL442647.2-201ENST00000429864 857 ntBASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 TP53TG3HP-202ENST00000569755 579 ntBASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 AC107373.2-201ENST00000607735 490 ntBASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC1Q9NTX5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ECHDC1Q9NTX5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ECHDC1Q9NTX5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.89■□□□□ 0.62
ECHDC1Q9NTX5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 CTBP2P3-201ENST00000585629 1255 ntBASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 INTS4P2-202ENST00000614726 2019 ntBASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC1Q9NTX5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 AC091951.1-201ENST00000512854 2465 ntBASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 AC134915.1-201ENST00000426461 574 ntBASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 WASH4P-201ENST00000564273 1246 ntBASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 AC120045.2-201ENST00000567334 178 ntBASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC1Q9NTX5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 MROH4P-201ENST00000431302 1578 ntBASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 AL359711.2-201ENST00000563105 872 ntBASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 AC124283.3-201ENST00000570869 594 ntBASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC1Q9NTX5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms