Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM7Q9NR12 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 AC092850.2-201ENST00000623821 2697 ntBASIC17.22■□□□□ 0.35
PDLIM7Q9NR12 KRT8P35-201ENST00000483942 1338 ntBASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 MIR5572-201ENST00000583188 137 ntBASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AC097724.1-201ENST00000609581 426 ntBASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AC091812.3-201ENST00000621362 345 ntBASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM7Q9NR12 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PDLIM7Q9NR12 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDLIM7Q9NR12 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.21■□□□□ 0.34
PDLIM7Q9NR12 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.21■□□□□ 0.34
PDLIM7Q9NR12 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 AC020658.6-201ENST00000623564 1870 ntBASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 POM121L10P-201ENST00000436994 1285 ntBASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.2■□□□□ 0.34
PDLIM7Q9NR12 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms