Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AC063952.3-201ENST00000467756 308 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 SIGLEC18P-201ENST00000602271 909 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 Z98259.2-201ENST00000641583 609 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AC134043.2-201ENST00000624206 2238 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 E2F3P2-201ENST00000447755 1422 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AL138781.2-201ENST00000617896 1843 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AC010141.1-201ENST00000411585 623 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 FTH1P22-201ENST00000456305 520 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 RN7SL173P-201ENST00000461853 292 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AP002490.2-201ENST00000524791 560 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 AC124068.2-201ENST00000569473 1109 ntBASIC14.1□□□□□ -0.15
CHD8Q9HCK8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 LINC01165-201ENST00000445190 1623 ntBASIC14.09□□□□□ -0.15
CHD8Q9HCK8 FKBP4P6-201ENST00000457486 1332 ntBASIC14.09□□□□□ -0.15
CHD8Q9HCK8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 RN7SL81P-201ENST00000493781 261 ntBASIC14.09□□□□□ -0.15
CHD8Q9HCK8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 CLUHP2-201ENST00000426660 1303 ntBASIC14.09□□□□□ -0.15
CHD8Q9HCK8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AC009560.1-201ENST00000620208 434 ntBASIC14.09□□□□□ -0.15
CHD8Q9HCK8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHD8Q9HCK8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CHD8Q9HCK8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.08□□□□□ -0.15
CHD8Q9HCK8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CHD8Q9HCK8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CHD8Q9HCK8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
CHD8Q9HCK8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CHD8Q9HCK8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CHD8Q9HCK8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms