Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 NKAIN1P1-201ENST00000435754 582 ntBASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 HSPB1P2-201ENST00000448722 546 ntBASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 AC044849.1-201ENST00000519737 1188 ntBASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 AL133499.1-201ENST00000596207 608 ntBASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 AC005622.1-201ENST00000636801 1703 ntBASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AL008707.1-201ENST00000422498 534 ntBASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AC026410.3-201ENST00000514280 936 ntBASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 AC023824.1-201ENST00000562945 2975 ntBASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2OQ9C0C9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AL662844.4-201ENST00000606367 2838 ntBASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AL138709.1-201ENST00000614840 1693 ntBASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms