Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 TMEM261P1-201ENST00000604899 340 ntBASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 AL365203.3-201ENST00000609742 2057 ntBASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
SSBP3Q9BWW4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 KRT18P43-201ENST00000469825 1281 ntBASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 RPL13AP25-201ENST00000484130 612 ntBASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 ELK1P1-201ENST00000485699 580 ntBASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AL391069.4-201ENST00000609583 481 ntBASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.03□□□□□ -0.32
SSBP3Q9BWW4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms