Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 HLA-H-201ENST00000383620 1096 ntBASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 BX842568.4-201ENST00000421222 227 ntBASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 AC005237.2-201ENST00000434368 219 ntBASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 YBX1P5-201ENST00000509441 847 ntBASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 AC087481.3-201ENST00000602886 1894 ntBASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHRDL1Q9BU40 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AL691432.1-201ENST00000596308 1422 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AC005089.1-201ENST00000619486 2241 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AP3S2-216ENST00000617003 1561 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AC112482.1-201ENST00000492080 688 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AC243562.2-201ENST00000561247 970 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 MIR3687-2-201ENST00000577708 61 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 MIR3687-1-201ENST00000614492 61 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AL513210.1-201ENST00000629608 234 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AC084121.4-201ENST00000641598 221 ntBASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AF228730.8-201ENST00000642140 221 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms