Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 TMPRSS11CP-201ENST00000453277 683 ntBASIC10.92□□□□□ -0.66
UPK3BQ9BT76 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 AC055876.2-201ENST00000531834 546 ntBASIC10.92□□□□□ -0.66
UPK3BQ9BT76 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 RRP7BP-205ENST00000566851 833 ntBASIC10.92□□□□□ -0.66
UPK3BQ9BT76 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 SRD5A3P1-201ENST00000603021 949 ntBASIC10.92□□□□□ -0.66
UPK3BQ9BT76 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 AC099568.2-201ENST00000609194 695 ntBASIC10.92□□□□□ -0.66
UPK3BQ9BT76 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 AC006449.5-201ENST00000610658 2098 ntBASIC10.92□□□□□ -0.66
UPK3BQ9BT76 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UPK3BQ9BT76 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 BNIP3P1-202ENST00000550043 1585 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 TIMM17BP1-201ENST00000545713 516 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AL132655.2-201ENST00000596276 594 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AL662799.1-202ENST00000614205 422 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AC004461.2-201ENST00000629517 803 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AF228730.6-201ENST00000641497 218 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AC084121.3-201ENST00000641716 218 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AL109936.8-201ENST00000641772 604 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AC105233.6-201ENST00000642093 218 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms