Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 AC026979.3-201ENST00000607315 403 ntBASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 FAM197Y3-203ENST00000618346 717 ntBASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 MROH4P-201ENST00000431302 1578 ntBASIC13.2□□□□□ -0.3
HDHD3Q9BSH5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 AC136604.1-201ENST00000418535 575 ntBASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 AC069335.1-201ENST00000489972 472 ntBASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 INTS4P1-203ENST00000641008 3683 ntBASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 CICP14-201ENST00000629111 2732 ntBASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 AC015656.1-201ENST00000624209 3578 ntBASIC13.19□□□□□ -0.3
HDHD3Q9BSH5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.18□□□□□ -0.3
HDHD3Q9BSH5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms