Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.07□□□□□ -0.16
USB1Q9BQ65 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AC055748.1-201ENST00000489836 959 ntBASIC14.07□□□□□ -0.16
USB1Q9BQ65 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.07□□□□□ -0.16
USB1Q9BQ65 AL109924.4-201ENST00000623089 670 ntBASIC14.07□□□□□ -0.16
USB1Q9BQ65 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 CICP20-201ENST00000443330 2801 ntBASIC14.07□□□□□ -0.16
USB1Q9BQ65 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 AL035633.1-201ENST00000406139 838 ntBASIC14.06□□□□□ -0.16
USB1Q9BQ65 AC087499.6-201ENST00000411576 835 ntBASIC14.06□□□□□ -0.16
USB1Q9BQ65 MRPS18AP1-201ENST00000414458 589 ntBASIC14.06□□□□□ -0.16
USB1Q9BQ65 AL353779.1-201ENST00000434793 351 ntBASIC14.06□□□□□ -0.16
USB1Q9BQ65 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
USB1Q9BQ65 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 AC007686.3-201ENST00000619017 3487 ntBASIC14.06□□□□□ -0.16
USB1Q9BQ65 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 AP001282.1-201ENST00000531301 1499 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms