Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 AC148477.4-201ENST00000613430 1793 ntBASIC16.62■□□□□ 0.25
YME1L1Q96TA2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 MIR4313-201ENST00000580760 101 ntBASIC16.62■□□□□ 0.25
YME1L1Q96TA2 AC138627.1-207ENST00000641560 1006 ntBASIC16.62■□□□□ 0.25
YME1L1Q96TA2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YME1L1Q96TA2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 AC025181.2-201ENST00000606994 802 ntBASIC16.61■□□□□ 0.25
YME1L1Q96TA2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 AC244157.2-201ENST00000616239 1006 ntBASIC16.61■□□□□ 0.25
YME1L1Q96TA2 ENPP7P14-201ENST00000621765 1040 ntBASIC16.61■□□□□ 0.25
YME1L1Q96TA2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 FLJ38576-201ENST00000623820 2459 ntBASIC16.61■□□□□ 0.25
YME1L1Q96TA2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YME1L1Q96TA2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 AC008894.3-201ENST00000624324 3103 ntBASIC16.6■□□□□ 0.25
YME1L1Q96TA2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.6■□□□□ 0.25
YME1L1Q96TA2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 AC007663.3-201ENST00000609632 465 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms