Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AP003680.1-201ENST00000598970 3660 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AC092127.1-201ENST00000567093 3455 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 BAATP1-201ENST00000412284 1225 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AC022137.2-201ENST00000503482 481 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 USP32P1-208ENST00000506594 1164 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 KRT18P25-201ENST00000508931 1278 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AP001582.1-201ENST00000525856 295 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 SLC25A47P1-201ENST00000531577 414 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 KRT17P8-201ENST00000540749 863 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 RAB43P1-201ENST00000561790 589 ntBASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK5RAP1Q96SZ6 AC105250.1-201ENST00000509378 2057 ntBASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 AC234783.1-201ENST00000441761 496 ntBASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 AC012441.1-201ENST00000446669 685 ntBASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK5RAP1Q96SZ6 CICP13-201ENST00000422015 2789 ntBASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms