Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
RNF31Q96EP0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF31Q96EP0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF31Q96EP0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF31Q96EP0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF31Q96EP0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RNF31Q96EP0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
RNF31Q96EP0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF31Q96EP0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RNF31Q96EP0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.08■□□□□ 0
RNF31Q96EP0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.08■□□□□ 0
RNF31Q96EP0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.08■□□□□ 0
RNF31Q96EP0 AC243562.2-201ENST00000561247 970 ntBASIC15.08■□□□□ 0
RNF31Q96EP0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 AL512343.1-201ENST00000605837 169 ntBASIC15.08■□□□□ 0
RNF31Q96EP0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.08■□□□□ 0
RNF31Q96EP0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.08■□□□□ 0
RNF31Q96EP0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RNF31Q96EP0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
RNF31Q96EP0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 AC006449.6-201ENST00000612330 2296 ntBASIC15.08■□□□□ 0
RNF31Q96EP0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF31Q96EP0 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.07■□□□□ 0
RNF31Q96EP0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RNF31Q96EP0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.07■□□□□ 0
RNF31Q96EP0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 AC099063.4-201ENST00000641099 1602 ntBASIC15.07■□□□□ 0
RNF31Q96EP0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.07■□□□□ 0
RNF31Q96EP0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.07■□□□□ 0
RNF31Q96EP0 AC004987.2-201ENST00000395959 1148 ntBASIC15.07■□□□□ 0
RNF31Q96EP0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.07■□□□□ 0
RNF31Q96EP0 AC092552.1-201ENST00000547243 906 ntBASIC15.07■□□□□ 0
RNF31Q96EP0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.07■□□□□ 0
RNF31Q96EP0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.07■□□□□ 0
RNF31Q96EP0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.07■□□□□ 0
RNF31Q96EP0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.07■□□□□ 0
RNF31Q96EP0 AC092337.1-201ENST00000568699 1129 ntBASIC15.07■□□□□ 0
RNF31Q96EP0 AC010319.3-201ENST00000597028 470 ntBASIC15.07■□□□□ 0
RNF31Q96EP0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RNF31Q96EP0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.07■□□□□ 0
RNF31Q96EP0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.07■□□□□ 0
RNF31Q96EP0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RNF31Q96EP0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RNF31Q96EP0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 REXO1L1P-202ENST00000608646 1974 ntBASIC15.07■□□□□ 0
RNF31Q96EP0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.07■□□□□ 0
RNF31Q96EP0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF31Q96EP0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RNF31Q96EP0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RNF31Q96EP0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RNF31Q96EP0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.06■□□□□ 0
RNF31Q96EP0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
RNF31Q96EP0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF31Q96EP0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.06■□□□□ 0
RNF31Q96EP0 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.06■□□□□ 0
RNF31Q96EP0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RNF31Q96EP0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF31Q96EP0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF31Q96EP0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
RNF31Q96EP0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms