Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 LINC01115-203ENST00000606068 577 ntBASIC16.07■□□□□ 0.16
HDAC11Q96DB2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.07■□□□□ 0.16
HDAC11Q96DB2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AC055876.3-201ENST00000431496 288 ntBASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AC044860.1-202ENST00000559481 777 ntBASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AC138649.4-201ENST00000612222 287 ntBASIC16.06■□□□□ 0.16
HDAC11Q96DB2 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AC093512.1-201ENST00000617969 520 ntBASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AF228730.6-201ENST00000641497 218 ntBASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AC084121.3-201ENST00000641716 218 ntBASIC16.06■□□□□ 0.16
HDAC11Q96DB2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.06■□□□□ 0.16
HDAC11Q96DB2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 TOMM22P5-201ENST00000416399 439 ntBASIC16.05■□□□□ 0.16
HDAC11Q96DB2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 AC015910.1-201ENST00000579400 975 ntBASIC16.05■□□□□ 0.16
HDAC11Q96DB2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDAC11Q96DB2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms