Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.02□□□□□ -0.16
CPNE4Q96A23 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE4Q96A23 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE4Q96A23 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CPNE4Q96A23 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CPNE4Q96A23 AL121723.1-201ENST00000445194 1519 ntBASIC14.02□□□□□ -0.16
CPNE4Q96A23 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE4Q96A23 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE4Q96A23 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE4Q96A23 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 API5-211ENST00000534695 560 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 AC015910.1-201ENST00000579400 975 ntBASIC14.02□□□□□ -0.17
CPNE4Q96A23 SPDYE22P-201ENST00000582158 798 ntBASIC14.02□□□□□ -0.17
CPNE4Q96A23 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.02□□□□□ -0.17
CPNE4Q96A23 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE4Q96A23 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE4Q96A23 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 RN7SL399P-201ENST00000471648 279 ntBASIC14.01□□□□□ -0.17
CPNE4Q96A23 RPL13AP25-201ENST00000484130 612 ntBASIC14.01□□□□□ -0.17
CPNE4Q96A23 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AC000095.1-201ENST00000603208 874 ntBASIC14.01□□□□□ -0.17
CPNE4Q96A23 AL662799.1-202ENST00000614205 422 ntBASIC14.01□□□□□ -0.17
CPNE4Q96A23 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 AL358472.5-202ENST00000641448 1267 ntBASIC14.01□□□□□ -0.17
CPNE4Q96A23 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.01□□□□□ -0.17
CPNE4Q96A23 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CPNE4Q96A23 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE4Q96A23 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms