Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 RPL37AP1-201ENST00000412502 279 ntBASIC13.68□□□□□ -0.22
SPTSSAQ969W0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 AC069120.2-201ENST00000524091 540 ntBASIC13.68□□□□□ -0.22
SPTSSAQ969W0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.68□□□□□ -0.22
SPTSSAQ969W0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 KRT8P44-201ENST00000441609 1350 ntBASIC13.68□□□□□ -0.22
SPTSSAQ969W0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSAQ969W0 Z97205.2-201ENST00000564697 1639 ntBASIC13.68□□□□□ -0.22
SPTSSAQ969W0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 AC107890.1-201ENST00000422478 521 ntBASIC13.67□□□□□ -0.22
SPTSSAQ969W0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 SPDYE12P-201ENST00000618416 771 ntBASIC13.67□□□□□ -0.22
SPTSSAQ969W0 AC073592.8-201ENST00000624126 511 ntBASIC13.67□□□□□ -0.22
SPTSSAQ969W0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SPTSSAQ969W0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SPTSSAQ969W0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms