Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.5■□□□□ 0.39
USP6NLQ92738 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.5■□□□□ 0.39
USP6NLQ92738 IMP3P2-201ENST00000489760 475 ntBASIC17.5■□□□□ 0.39
USP6NLQ92738 AC044849.1-201ENST00000519737 1188 ntBASIC17.5■□□□□ 0.39
USP6NLQ92738 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.5■□□□□ 0.39
USP6NLQ92738 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.5■□□□□ 0.39
USP6NLQ92738 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
USP6NLQ92738 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.5■□□□□ 0.39
USP6NLQ92738 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.5■□□□□ 0.39
USP6NLQ92738 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
USP6NLQ92738 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.5■□□□□ 0.39
USP6NLQ92738 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.5■□□□□ 0.39
USP6NLQ92738 AC046158.3-201ENST00000624947 2558 ntBASIC17.5■□□□□ 0.39
USP6NLQ92738 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.5■□□□□ 0.39
USP6NLQ92738 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
USP6NLQ92738 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
USP6NLQ92738 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
USP6NLQ92738 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
USP6NLQ92738 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP6NLQ92738 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 CICP6-201ENST00000457191 2729 ntBASIC17.49■□□□□ 0.39
USP6NLQ92738 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.49■□□□□ 0.39
USP6NLQ92738 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.49■□□□□ 0.39
USP6NLQ92738 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP6NLQ92738 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.49■□□□□ 0.39
USP6NLQ92738 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
USP6NLQ92738 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP6NLQ92738 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.49■□□□□ 0.39
USP6NLQ92738 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 HINT2P1-201ENST00000419438 481 ntBASIC17.49■□□□□ 0.39
USP6NLQ92738 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.49■□□□□ 0.39
USP6NLQ92738 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 SERPINA13P-202ENST00000478994 924 ntBASIC17.49■□□□□ 0.39
USP6NLQ92738 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.49■□□□□ 0.39
USP6NLQ92738 MIR4706-201ENST00000582134 82 ntBASIC17.49■□□□□ 0.39
USP6NLQ92738 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.49■□□□□ 0.39
USP6NLQ92738 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
USP6NLQ92738 AC007663.3-201ENST00000609632 465 ntBASIC17.49■□□□□ 0.39
USP6NLQ92738 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.49■□□□□ 0.39
USP6NLQ92738 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP6NLQ92738 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP6NLQ92738 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP6NLQ92738 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.48■□□□□ 0.39
USP6NLQ92738 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
USP6NLQ92738 AC091046.1-201ENST00000331871 207 ntBASIC17.48■□□□□ 0.39
USP6NLQ92738 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.48■□□□□ 0.39
USP6NLQ92738 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.48■□□□□ 0.39
USP6NLQ92738 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 FAM8A4P-201ENST00000435433 1213 ntBASIC17.48■□□□□ 0.39
USP6NLQ92738 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.48■□□□□ 0.39
USP6NLQ92738 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.48■□□□□ 0.39
USP6NLQ92738 AP003171.2-201ENST00000528208 925 ntBASIC17.48■□□□□ 0.39
USP6NLQ92738 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP6NLQ92738 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
USP6NLQ92738 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms