Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 AC123567.1-201ENST00000548294 1261 ntBASIC16.47■□□□□ 0.23
UBA3Q8TBC4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 MIR3197-201ENST00000582241 73 ntBASIC16.47■□□□□ 0.23
UBA3Q8TBC4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.47■□□□□ 0.23
UBA3Q8TBC4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 CICP11-201ENST00000434745 2827 ntBASIC16.47■□□□□ 0.23
UBA3Q8TBC4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBA3Q8TBC4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 AC138035.3-201ENST00000622706 2791 ntBASIC16.46■□□□□ 0.23
UBA3Q8TBC4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 AC008494.3-201ENST00000606615 944 ntBASIC16.46■□□□□ 0.23
UBA3Q8TBC4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBA3Q8TBC4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AC022532.1-201ENST00000624563 1728 ntBASIC16.45■□□□□ 0.22
UBA3Q8TBC4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.45■□□□□ 0.22
UBA3Q8TBC4 MYCLP2-201ENST00000449268 967 ntBASIC16.45■□□□□ 0.22
UBA3Q8TBC4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms