Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 RPL13P2-201ENST00000440687 659 ntBASIC16.41■□□□□ 0.22
TTC16Q8NEE8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 CROCCP4-201ENST00000457096 498 ntBASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 FAM86LP-201ENST00000478302 853 ntBASIC16.41■□□□□ 0.22
TTC16Q8NEE8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 RRP7BP-205ENST00000566851 833 ntBASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AC133539.2-201ENST00000604757 467 ntBASIC16.41■□□□□ 0.22
TTC16Q8NEE8 TMEM261P1-201ENST00000604899 340 ntBASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AL162274.1-201ENST00000617191 1098 ntBASIC16.41■□□□□ 0.22
TTC16Q8NEE8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC16Q8NEE8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 AL596087.1-201ENST00000400979 1969 ntBASIC16.4■□□□□ 0.22
TTC16Q8NEE8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 AC008735.3-201ENST00000596646 500 ntBASIC16.4■□□□□ 0.22
TTC16Q8NEE8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 MIR6752-201ENST00000618442 71 ntBASIC16.4■□□□□ 0.22
TTC16Q8NEE8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC16Q8NEE8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
TTC16Q8NEE8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 AL607033.1-201ENST00000623900 1599 ntBASIC16.39■□□□□ 0.21
TTC16Q8NEE8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TTC16Q8NEE8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms