Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIPK4Q8NE63 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AC093724.1-201ENST00000448659 1027 ntBASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AC092910.1-201ENST00000482027 1129 ntBASIC15.21■□□□□ 0.03
HIPK4Q8NE63 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AP002469.2-201ENST00000531724 424 ntBASIC15.21■□□□□ 0.03
HIPK4Q8NE63 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 AC148477.8-201ENST00000624298 468 ntBASIC15.21■□□□□ 0.03
HIPK4Q8NE63 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIPK4Q8NE63 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.21■□□□□ 0.02
HIPK4Q8NE63 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 AC018892.3-201ENST00000623986 2499 ntBASIC15.2■□□□□ 0.02
HIPK4Q8NE63 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 VN2R19P-201ENST00000442399 1052 ntBASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIPK4Q8NE63 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms