Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PRYP6-201ENST00000514804 343 ntBASIC14.35□□□□□ -0.11
SETD9Q8NE22 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 AC021087.4-201ENST00000563761 564 ntBASIC14.35□□□□□ -0.11
SETD9Q8NE22 OR7E47P-204ENST00000575924 449 ntBASIC14.35□□□□□ -0.11
SETD9Q8NE22 AC024267.1-201ENST00000582320 895 ntBASIC14.35□□□□□ -0.11
SETD9Q8NE22 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 AL009183.1-201ENST00000603760 355 ntBASIC14.35□□□□□ -0.11
SETD9Q8NE22 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 AL928921.2-201ENST00000641325 2442 ntBASIC14.35□□□□□ -0.11
SETD9Q8NE22 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SETD9Q8NE22 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SETD9Q8NE22 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.34□□□□□ -0.11
SETD9Q8NE22 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SETD9Q8NE22 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SETD9Q8NE22 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.33□□□□□ -0.11
SETD9Q8NE22 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SETD9Q8NE22 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SETD9Q8NE22 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SETD9Q8NE22 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SETD9Q8NE22 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SETD9Q8NE22 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SETD9Q8NE22 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SETD9Q8NE22 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SETD9Q8NE22 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms