Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 AC027601.4-201ENST00000611259 610 ntBASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 FAM197Y3-203ENST00000618346 717 ntBASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 IL9RP2-201ENST00000423948 1312 ntBASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 KRT126P-201ENST00000549467 1181 ntBASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC170Q8IYT3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 SPDYE17-201ENST00000412399 783 ntBASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 SLC25A39P2-201ENST00000537614 270 ntBASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 AC106730.1-201ENST00000566722 1090 ntBASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 AP000845.1-201ENST00000581677 2131 ntBASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC170Q8IYT3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms