Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf56Q8IXR9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 KRT8P22-201ENST00000562317 1415 ntBASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 MYCLP2-201ENST00000449268 967 ntBASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 TP53TG3HP-202ENST00000569755 579 ntBASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 SPDYE22P-201ENST00000582158 798 ntBASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AC007431.3-201ENST00000623221 587 ntBASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 PRSS30P-206ENST00000641773 873 ntBASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf56Q8IXR9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 REXO1L2P-201ENST00000425429 2069 ntBASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 AL359711.2-201ENST00000563105 872 ntBASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf56Q8IXR9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms