Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AC126335.2-201ENST00000623362 4637 ntBASIC15.64■□□□□ 0.09
TRIM42Q8IWZ5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM42Q8IWZ5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM42Q8IWZ5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM42Q8IWZ5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM42Q8IWZ5 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM42Q8IWZ5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 AC104109.2-201ENST00000602919 1418 ntBASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 AC098859.1-201ENST00000502915 1238 ntBASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 UNC93B6-202ENST00000528242 690 ntBASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM42Q8IWZ5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 MIR574-201ENST00000385209 96 ntBASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 AC145285.3-201ENST00000564603 959 ntBASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 Z83851.2-201ENST00000609564 659 ntBASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 AC005252.3-201ENST00000623855 2258 ntBASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 AC139749.1-202ENST00000617529 3139 ntBASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM42Q8IWZ5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms