Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC60Q8IWA6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC60Q8IWA6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC60Q8IWA6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC60Q8IWA6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC60Q8IWA6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC60Q8IWA6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC60Q8IWA6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC60Q8IWA6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC60Q8IWA6 KRT8P35-201ENST00000483942 1338 ntBASIC17.21■□□□□ 0.34
CCDC60Q8IWA6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 AC148477.4-201ENST00000613430 1793 ntBASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 KLF2P2-201ENST00000416807 1039 ntBASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 AP000812.2-201ENST00000538934 718 ntBASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 KRT90P-201ENST00000549264 1064 ntBASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC60Q8IWA6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 AC007950.2-201ENST00000615045 2347 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 AC099336.1-201ENST00000417053 1171 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 AC016694.1-201ENST00000434179 700 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 KRT18P25-201ENST00000508931 1278 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 AC025279.2-201ENST00000569730 653 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 AC145423.3-201ENST00000615987 467 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 PAUPAR-201ENST00000630360 2965 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 AL645728.2-202ENST00000641679 227 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 AL138709.1-201ENST00000614840 1693 ntBASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC60Q8IWA6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 AL158070.2-201ENST00000623713 1621 ntBASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms